Thanks Christian,
I have another question:
I extracted my brain using bet. Then I ran FEAT(GUI) and deleted 4 volumes and did
motion correction (all other options were turned off). I took the filtered_func_data
and ran it through Melodic (MCFLIRT, STC, and BET were turned off).
I took the same brain, extracted it with bet. Then I ran Melodic and deleted 4
volumes and did motion correction (STC and BET were turned off).
The results were 23 components in case 1 and 22 components in case 2. Is FEAT
doing mcflirt with different options than Melodic?
jack
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