Hi - it sounds like you're doing the right thing - if you are able to run
"slices" on (for example) highres in the main FEAT directory then AFNI
should be able to see it as an anatomical - if not then probably AFNI is
not running correctly - probably best to email the AFNI email list.
thanks.
On Mon, 14 Apr 2003, mark wrote:
> Hello,
>
> I just installed afni and attempted to view my results in AFNI for first
> time. I followed steps as shown:
>
> feat2afni session1.feat
> cd session1.feat
> afni
>
> now afni starts, i click on the 'switch anatomy', but nothing happens, it
> just beeps back at me. :)
>
> presumably it cant find any images to load? Not sure what I'm doing
> wrong. In my feat directory are symb links for all the anatomical images.
> For example:
> highres.hdr --> reg/highres.hdr
> And in the reg subdirectory, there is then:
> highres.hdr --> /home/data/.../mybrain.hdr
>
Stephen M. Smith MA DPhil CEng MIEE
Associate Director, FMRIB and Analysis Research Coordinator
Oxford University Centre for Functional MRI of the Brain
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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