Hi,
I am using the --tcustom option in slicetimer to specify the time at
which each slice is acquired. The EPI data are axial slices, saved in
the avw data files from the inferior to superior direction. Which slice
is the "first" one in slicetimer ? I assume that inferior one, that is,
the first slice in the file.
To which slice does slicetimer correct the timing ? To the first
acquired one or to the middle slice (in time) of the acquisition period
? Is there a way to specify this ?
TIA.
Best, Arun
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