Thanks Steve.
Conny
Stephen Smith wrote:
>Hi Conny. I suspect that all that is happening is that there is no
>activation at this choice of thresholds. Note that it is possible with
>cluster-based thresholding to _reduce_ the _Z_ threshold and actually see
>some activation disappear (because the significance of a cluster depends
>on its size _and_ the threshold that was used).
>
>Thanks, Steve.
>
>
>On Fri, 21 Mar 2003, Conny Schmidt wrote:
>
>
>
>>Dear FSL community,
>>
>>I tried to make some fMRI analysis with FEAT, but for one dataset some cuorious
>>things happend. At a threshold of z>2.5 ist runs through as expected but with a
>>lower threshold than that, data are rendered using zmin=1000 zmax=-1000
>>therefore producing no statistical results. I append the two respective
>>logfiles. Both analysis were performed with full level analysis (and I also
>>tried the thesholding only ... with the same result).
>>
>>What is the problem there?
>>
>>Best regards,
>>Conny
>>
>>
>>
>>Started FEAT at Fri Mar 21 20:46:15 CET 2003 on chap02
>>Total original volumes = 52
>>/usr/local/fsl/bin/avwroi
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/example_func
>>26 1
>>
>> /usr/local/fsl/bin/mcflirt -in
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20
>>-out
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/prefiltered_func_data_mcf
>>-plots -refvol 26
>>
>>mv
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/prefiltered_func_data_mcf.par
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc.par
>>
>>echo "set term pbm color ; set size 1,0.5 ; set title 'MCFLIRT estimated
>>rotations (radians)' ; plot
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc.par'
>>using 1 title 'x' with lines ,
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc.par'
>>using 2 title 'y' with lines ,
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc.par'
>>using 3 title 'z' with lines" | /usr/local/fsl/bin/gnuplot >
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc_rot.ppm
>>
>>/usr/local/fsl/bin/convert
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc_rot.ppm
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc_rot.gif
>>
>>/bin/rm -f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc_rot.ppm
>>
>>echo "set term pbm color ; set size 1,0.5 ; set title 'MCFLIRT estimated
>>translations (mm)' ; plot
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc.par'
>>using 4 title 'x' with lines ,
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc.par'
>>using 5 title 'y' with lines ,
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc.par'
>>using 6 title 'z' with lines" | /usr/local/fsl/bin/gnuplot >
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc_trans.ppm
>>
>>/usr/local/fsl/bin/convert
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc_trans.ppm
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc_trans.gif
>>
>>/bin/rm -f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mc_trans.ppm
>>
>>/usr/local/fsl/bin/betfunc
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/prefiltered_func_data_mcf
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/prefiltered_func_data_bet
>>
>>/usr/local/fsl/bin/ip
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/prefiltered_func_data_bet
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/filtered_func_data
>>10 -s 2.12314225053 -m
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mask
>>-I 10000 -t 16.6666666667 -1
>>rm -rf
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/prefiltered_func_data*
>>
>>/usr/local/fsl/bin/film_gls -rn
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats
>>-sa -ms 5 -sp /usr/local/fsl/bin/susan_smooth
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/filtered_func_data
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/design.mat
>>110.284800
>>Log directory is:
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats
>>Loading image... Completed
>>Applying threshold to Series... Completed
>>Calculating residuals...
>>Completed
>>Estimating residual autocorrelation...
>>Calculating raw AutoCorrs... Completed
>>mode = 10856.8
>>sig = 1707
>>Spatially smoothing auto corr estimates
>>/usr/local/fsl/bin/susan_smooth
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/preSmoothVol
>>1
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/postSmoothVol
>>5 3D 0 1
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/epivolume
>>569
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/usanSize
>>...........
>>rm -rf
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/postSmoothVol*
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/preSmoothVol*
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/usanSize*
>>Completed
>>Tukey M = 7
>>Tukey estimates... Completed
>>Completed
>>Prewhitening and Computing PEs...
>>0.00824968,0.0164994,0.024749,0.0329987,0.0412484,0.0494981,0.0577478,0.0659975,0.0742471,0.0824968,0.0907465,0.0989962,0.107246,0.115496,0.123745,0.131995,0.140245,0.148494,0.156744,0.164994,0.173243,0.181493,0.189743,0.197992,0.206242,0.214492,0.222741,0.230991,0.239241,0.24749,0.25574,0.26399,0.27224,0.280489,0.288739,0.296989,0.305238,0.313488,0.321738,0.329987,0.338237,0.346487,0.354736,0.362986,0.371236,0.379485,0.387735,0.395985,0.404234,0.412484,0.420734,0.428984,0.437233,0.445483,0.453733,0.461982,0.470232,0.478482,0.486731,0.494981,0.503231,0.51148,0.51973,0.52798,0.536229,0.544479,0.552729,0.560978,0.569228,0.577478,0.585727,0.593977,0.602227,0.610477,0.618726,0.626976,0.635226,0.643475,0.651725,0.659975,0.668224,0.676474,0.684724,0.692973,0.701223,0.709473,0.717722,0.725972,0.734222,0.742471,0.750721,0.758971,0.76722,0.77547,0.78372,0.79197,0.800219,0.808469,0.816719,0.824968,0.833218,0.841468,0.849717,0.857967,0.866217,0.874466,0.882716,0.890966,0.899215,0.907!
>>
>>
>46!
>
>
>>5,0.915715,0.923964,0.932214,0.940464,0.948714,0.956963,0.965213,0.973463,0.981712,0.989962,0.998212,Completed
>>Saving results...
>>Unthresholding Series... Completed
>>Saving image... Completed
>>Thresholding Series... Completed
>>Unthresholding Series... Completed
>>Saving image... Completed
>>Unthresholding Series... Completed
>>Saving image... Completed
>>Completed
>>/usr/local/fsl/bin/smoothest -d 4.800000e+01 -m
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mask
>>-r
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/res4d
>>
>>
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/smoothness
>>
>>rm -f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/res4d*
>>
>>/usr/local/fsl/bin/contrast_mgr
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/design.con
>>Loading image... Completed
>>Thresholding Series... Completed
>>/usr/local/fsl/bin/avwmaths
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/stats/zstat1
>>-mul
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/mask
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/thresh_zstat1
>>
>>MaximumZ(1)=7.396406
>>/usr/local/fsl/bin/cluster -i
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/thresh_zstat1
>> -t 2.2 -p 0.01 -d 0.135539 --volume=121338
>>--othresh=/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/thresh_zstat1
>>-o
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/cluster_mask_zstat1
>>--connectivity=26 >
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/cluster_zstat1.txt
>>
>>/usr/local/fsl/bin/cluster2html
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat
>>cluster_zstat1
>>
>>MaximumZ(1)=0.000000
>>Rendering using zmin=1000 zmax=-1000
>>exec /usr/local/fsl/bin/tsplot
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat
>>-f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/filtered_func_data
>>
>>Finished FEAT at Fri Mar 21 20:51:38 CET 2003
>>To view the FEAT report point your web browser at
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20++.feat/report.html
>>
>>
>>
>>Started FEAT at Fri Mar 21 20:56:17 CET 2003 on chap02
>>Total original volumes = 52
>>/usr/local/fsl/bin/avwroi
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/example_func
>>26 1
>>
>> /usr/local/fsl/bin/mcflirt -in
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20
>>-out
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/prefiltered_func_data_mcf
>>-plots -refvol 26
>>
>>mv
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/prefiltered_func_data_mcf.par
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc.par
>>
>>echo "set term pbm color ; set size 1,0.5 ; set title 'MCFLIRT estimated
>>rotations (radians)' ; plot
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc.par'
>>using 1 title 'x' with lines ,
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc.par'
>>using 2 title 'y' with lines ,
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc.par'
>>using 3 title 'z' with lines" | /usr/local/fsl/bin/gnuplot >
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc_rot.ppm
>>
>>/usr/local/fsl/bin/convert
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc_rot.ppm
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc_rot.gif
>>
>>/bin/rm -f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc_rot.ppm
>>
>>echo "set term pbm color ; set size 1,0.5 ; set title 'MCFLIRT estimated
>>translations (mm)' ; plot
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc.par'
>>using 4 title 'x' with lines ,
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc.par'
>>using 5 title 'y' with lines ,
>>'/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc.par'
>>using 6 title 'z' with lines" | /usr/local/fsl/bin/gnuplot >
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc_trans.ppm
>>
>>/usr/local/fsl/bin/convert
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc_trans.ppm
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc_trans.gif
>>
>>/bin/rm -f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mc_trans.ppm
>>
>>/usr/local/fsl/bin/betfunc
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/prefiltered_func_data_mcf
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/prefiltered_func_data_bet
>>
>>/usr/local/fsl/bin/ip
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/prefiltered_func_data_bet
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/filtered_func_data
>>10 -s 2.12314225053 -m
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mask
>>-I 10000 -t 16.6666666667 -1
>>rm -rf
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/prefiltered_func_data*
>>
>>/usr/local/fsl/bin/film_gls -rn
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats
>>-sa -ms 5 -sp /usr/local/fsl/bin/susan_smooth
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/filtered_func_data
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/design.mat
>>110.284800
>>Log directory is:
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats
>>Loading image... Completed
>>Applying threshold to Series... Completed
>>Calculating residuals...
>>Completed
>>Estimating residual autocorrelation...
>>Calculating raw AutoCorrs... Completed
>>mode = 10856.8
>>sig = 1707
>>Spatially smoothing auto corr estimates
>>/usr/local/fsl/bin/susan_smooth
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/preSmoothVol
>>1
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/postSmoothVol
>>5 3D 0 1
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/epivolume
>>569
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/usanSize
>>...........
>>rm -rf
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/postSmoothVol*
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/preSmoothVol*
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/usanSize*
>>Completed
>>Tukey M = 7
>>Tukey estimates... Completed
>>Completed
>>Prewhitening and Computing PEs...
>>0.00824968,0.0164994,0.024749,0.0329987,0.0412484,0.0494981,0.0577478,0.0659975,0.0742471,0.0824968,0.0907465,0.0989962,0.107246,0.115496,0.123745,0.131995,0.140245,0.148494,0.156744,0.164994,0.173243,0.181493,0.189743,0.197992,0.206242,0.214492,0.222741,0.230991,0.239241,0.24749,0.25574,0.26399,0.27224,0.280489,0.288739,0.296989,0.305238,0.313488,0.321738,0.329987,0.338237,0.346487,0.354736,0.362986,0.371236,0.379485,0.387735,0.395985,0.404234,0.412484,0.420734,0.428984,0.437233,0.445483,0.453733,0.461982,0.470232,0.478482,0.486731,0.494981,0.503231,0.51148,0.51973,0.52798,0.536229,0.544479,0.552729,0.560978,0.569228,0.577478,0.585727,0.593977,0.602227,0.610477,0.618726,0.626976,0.635226,0.643475,0.651725,0.659975,0.668224,0.676474,0.684724,0.692973,0.701223,0.709473,0.717722,0.725972,0.734222,0.742471,0.750721,0.758971,0.76722,0.77547,0.78372,0.79197,0.800219,0.808469,0.816719,0.824968,0.833218,0.841468,0.849717,0.857967,0.866217,0.874466,0.882716,0.890966,0.899215,0.907!
>>
>>
>46!
>
>
>>5,0.915715,0.923964,0.932214,0.940464,0.948714,0.956963,0.965213,0.973463,0.981712,0.989962,0.998212,Completed
>>Saving results...
>>Unthresholding Series... Completed
>>Saving image... Completed
>>Thresholding Series... Completed
>>Unthresholding Series... Completed
>>Saving image... Completed
>>Unthresholding Series... Completed
>>Saving image... Completed
>>Completed
>>/usr/local/fsl/bin/smoothest -d 4.800000e+01 -m
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mask
>>-r
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/res4d
>>
>>
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/smoothness
>>
>>rm -f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/res4d*
>>
>>/usr/local/fsl/bin/contrast_mgr
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/design.con
>>Loading image... Completed
>>Thresholding Series... Completed
>>/usr/local/fsl/bin/avwmaths
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/stats/zstat1
>>-mul
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/mask
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/thresh_zstat1
>>
>>MaximumZ(1)=7.396406
>>/usr/local/fsl/bin/cluster -i
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/thresh_zstat1
>> -t 2.5 -p 0.01 -d 0.135539 --volume=121338
>>--othresh=/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/thresh_zstat1
>>-o
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/cluster_mask_zstat1
>>--connectivity=26 >
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/cluster_zstat1.txt
>>
>>/usr/local/fsl/bin/cluster2html
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat
>>cluster_zstat1
>>
>>MaximumZ(1)=7.396406
>>Rendering using zmin=2.510926 zmax=7.396406
>>/usr/local/fsl/bin/overlay 1 0
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/example_func
>>-a
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/thresh_zstat1
>>2.510926 7.396406
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/Rendered_thresh_zstat1
>>
>>/usr/local/fsl/bin/slicer
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/Rendered_thresh_zstat1
>>-A 750
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/Rendered_thresh_zstat1.ppm
>>
>>/usr/local/fsl/bin/convert
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/Rendered_thresh_zstat1.ppm
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/Rendered_thresh_zstat1.gif
>>
>>/bin/rm -f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/Rendered_thresh_zstat1.ppm
>>
>>exec /usr/local/fsl/bin/tsplot
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat
>>-f
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/filtered_func_data
>>
>>Finished FEAT at Fri Mar 21 21:01:43 CET 2003
>>To view the FEAT report point your web browser at
>>/home/conny/data_chap06/conny/meine/studien_hippo_test/hippo_test_29/hippo_test_29_sense_20+++.feat/report.html
>>
>>
>>
>
> Stephen M. Smith MA DPhil CEng MIEE
> Associate Director, FMRIB and Analysis Research Coordinator
>
> Oxford University Centre for Functional MRI of the Brain
> John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
> +44 (0) 1865 222726 (fax 222717)
>
> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
>
>
--
------------------------------------------------------------------------
Conny Schmidt
Institute for Biomedical Engineering
ETH and University Zurich Phone: +41-1-632 71 34
Gloriastr. 35 Fax: +41-1-632 11 93
CH-8092 Zurich, Switzerland Email: [log in to unmask]
private:
Oerlikonerstr. 5
CH-8057 Zurich, Switzerland Phone: +41-1-363 13 39
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