Hi - I understand from your mail that higher-level analysis should also
produce reports of clusters and a local maxima list, however this does not
happen in our case. Clicking higher-level rendered output-images in the
report.html page does not produce reports and lists in a way similar to
lower-level output. So apparently, we have a problem?
Maybe I could also point out a second issue that struck me as strange: I
tried using Featquery and renderhighres first on a .gfeat directory and then
on a cope1.feat directory of a higher-level analysis and in both cases they
didn't work. They performed normally on lower-level feat-directories though.
Is there a way to get these programs to work on higher-level dirs as well?
Thanks,
Rutger.
-----Original Message-----
From: Stephen Smith [mailto:[log in to unmask]]
Sent: vrijdag 30 mei 2003 12:08
To: [log in to unmask]
Subject: Re: [FSL] Higher level FEAT: listing local maxima
Hi - I'm not sure I understand the question - by default all higher-level
analysis in FEAT is carried out in standard space (MNI152), so the
cluster-reporting and local-maxima list that are shown on the web page
report are in this space - does that answer the question?
thanks :)
On Fri, 30 May 2003, Goekoop, R. wrote:
>
> Dear all,
>
> Is there perhaps a way to get a list of all cluster-coordinates and
> local maxima in Talairach-space (and/or or voxel-space) for output
> from a higher-level analysis in FEAT?
>
> Thanks,
>
> Rutger.
>
> Drs. R. Goekoop, MD.
> Department of Neurology
> Vrije Universiteit Medical Centre
> P.O. Box 7057, 1007 MB
> Amsterdam, the Netherlands
> Phone: +31 20 444 0316
> E-mail: [log in to unmask] <mailto:[log in to unmask]>
>
>
>
Stephen M. Smith MA DPhil CEng MIEE
Associate Director, FMRIB and Analysis Research Coordinator
Oxford University Centre for Functional MRI of the Brain
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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