Hi - I _think_ this sounds ok, but Mark can confirm this - he's away until
Monday though.
Thanks, Steve.
On Wed, 3 Apr 2002, Pasi Tuunanen wrote:
> Good morning,
>
> I wrote some time ago about my registration-problems occurring only in
> "certain" slices. I think I may have found somekind of a solution, but I
> would like to get some justification for it...
>
> To guide flirt to "stretch" also the problem slices to the whole area of the
> reference slice, I used as -init mat-file one of the upper slice output
> mat-files. This way flirt managed to produce quite nice registration. Is this
> a proper way to use -init? The result varies slightly, if I use mat from 1st,
> 2nd or 3rd slice.
>
> With best regards,
>
> Pasi Tuunanen
>
Stephen M. Smith
Head of Image Analysis, FMRIB
Oxford University Centre for Functional MRI of the Brain
John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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