All the header files were intact, so I increased the swap space and now it's
running fine!
Thanks for your help,
Kirk
----- Original Message -----
From: "Stephen Smith" <[log in to unmask]>
To: <[log in to unmask]>
Sent: Thursday, January 10, 2002 5:39 AM
Subject: Re: [FSL] mcflirt problems
> Hi - another possibility, given that this ran ok on your Sun, is that you
> don't have enough swap space setup on your linux box - try increasing swap
> and trying again....
>
> thanks :)
>
> Stephen M. Smith
> Head of Image Analysis, FMRIB
>
> Oxford University Centre for Functional MRI of the Brain
> John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
> +44 (0) 1865 222726 (fax 222717)
>
> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
>
> On Thu, 10 Jan 2002, Peter Bannister wrote:
>
> > Hi Kirk
> >
> > It is possible that the header file for the data is corrupted and/ or
> > missing fields. If you look at the *.hdr file it should be clear if any
> > voxel/ timeseries dimensions are missing
> >
> > regards
> > Peter
> >
> > On Wed, 9 Jan 2002, Kirk Erickson wrote:
> >
> > > Hi, > > I have FSL running on Linux (Mandrake 8.1) with 512 MB of RAM
> > and am having problems analyzing a 4D data set of 185 MB. Specifically,
> > the process crashes whenever I run mcflirt either from the GUI (in FEAT)
> > or the command line. I downloaded the FSL evaluation data set and it
> > ran fine. Therefore, it doesn't seem likely to be a problem with the
> > way I've installed FSL. I've now also analyzed the 4D data set in FSL
> > on a Solaris with 1GB of RAM. Is 512 MB not enough to run a data set of
> > 185 MB? Or does the problem lie in the way in which Mandrake is using
> > memory? Any suggestions? > > Thanks, > Kirk >
> >
> > --
> > Peter R. Bannister
> > Analysis Group, FMRIB
> > http://www.fmrib.ox.ac.uk/~prb
> >
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