Hi All,
Congrats to the FSL crew for sucessfully porting FSL to OS X. Its
working like a charm and passed the feeds tests with flying colors.
Results for Dual 800 MHz G4, 1 Gbyte RAM, Mac OS X.1
time: 4667.320sec (77.78 min) of cpu time running a single feeds
~80 min running two feeds simultaneously
Specifics follow below:
Bob
--
Robert C. Coghill, Ph.D.
Department of Neurobiology and Anatomy [log in to unmask]
Wake Forest University School of Medicine phone: (336) 716-4284
Winston-Salem, NC 27157-1010 fax: (336) 716-4534
http://www.wfubmc.edu/nba/faculty/coghill/coghill.html
FSL Evaluation and Example Data Suite v1.3x
start time = Thu Nov 29 12:47:40 EST 2001
hostname = localhost
os = Darwin localhost 1.4 Darwin Kernel Version 1.4: Sun Sep 9 15:39:59 PDT 2001; root:xnu/xnu-201.obj~1/RELEASE_PPC Power Macintosh powerpc
Starting BET at Thu Nov 29 12:47:40 EST 2001
/usr/local/fsl/bin/bet /Users/rcoghill/Data/feeds1.3x/data/structural /Users/rcoghill/Data/feeds1.3x/results/structural_brain
% error = 0.0
Starting SUSAN at Thu Nov 29 12:48:24 EST 2001
/usr/local/fsl/bin/susan_smooth /Users/rcoghill/Data/feeds1.3x/data/structural 2000 /Users/rcoghill/Data/feeds1.3x/results/structural_susan 2 3 1 0
% error = 0.0
Starting FAST at Thu Nov 29 12:54:46 EST 2001
/usr/local/fsl/bin/fast -od /Users/rcoghill/Data/feeds1.3x/results/structural_brain -ob -or -e -ov /Users/rcoghill/Data/feeds1.3x/data/structural_brain
checking error on single-image binary segmentation:
% error = 0.0497962521962
checking error on bias field:
% error = 0.0
checking error on restored image:
% error = 0.000563026096385
checking error on partial volume images:
% error = 0.313549442691
% error = 0.259332524062
% error = 0.252021228133
Starting FLIRT at Thu Nov 29 13:10:41 EST 2001
/usr/local/fsl/bin/flirt -ref /usr/local/fsl/etc/standard/avg152T1_brain -in /Users/rcoghill/Data/feeds1.3x/data/structural_brain -out /Users/rcoghill/Data/feeds1.3x/results/structural_brain2standard -omat /Users/rcoghill/Data/feeds1.3x/results/structural_brain2standard.mat -interp sinc
% error = 0.00367959574537
Starting PRELUDE & FUGUE at Thu Nov 29 13:16:43 EST 2001
/usr/local/fsl/bin/prelude -c /Users/rcoghill/Data/feeds1.3x/data/fieldmap -u /Users/rcoghill/Data/feeds1.3x/results/unwrapped_phase
% error = 0.0
/usr/local/fsl/bin/fugue -i /Users/rcoghill/Data/feeds1.3x/data/epi -p /Users/rcoghill/Data/feeds1.3x/results/unwrapped_phase -d 0.295 -u /Users/rcoghill/Data/feeds1.3x/results/unwarped_epi
% error = 0.0
Starting SIENAX at Thu Nov 29 13:16:47 EST 2001
/usr/local/fsl/bin/sienax /Users/rcoghill/Data/feeds1.3x/results/structural -d
% error = 0.0369103327011
Starting FEAT at Thu Nov 29 13:38:30 EST 2001
/usr/local/fsl/bin/feat /tmp/fsl_015307_design.fsf
checking error on filtered functional data:
% error = 0.193797958344
checking error on raw Z stat images:
% error = 0.217556170179
% error = 0.165176261803
% error = 0.293204599636
checking error on thresholded Z stat images:
% error = 0.28675490949
% error = 0.295203093919
% error = 0.254472600008
checking error on position of largest cluster of Talairached zfstat1:
% error = 0.0
% error = 0.0
% error = 0.0
% error = 0.074
% error = 0.1
% error = 0.09
Starting MELODIC at Thu Nov 29 14:03:17 EST 2001
/usr/local/fsl/bin/melodic -i /Users/rcoghill/Data/feeds1.3x/data/fmri -o /Users/rcoghill/Data/feeds1.3x/results/fmri.ica -d 45
% error = 0.0
All tests passed
end time = Thu Nov 29 14:10:16 EST 2001
4667.320u 228.780s 1:22:36.68 98.7% 0+0k 22+1447io 0pf+0w
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