Dear SPM community,
I know orientation has been covered quite a bit already, but could not find
this specific issue in the archives:
My data is in axial slices that require the following flips to bring them
into radiological orientation:
sagittal images must be flipped horizontally
axial images must be flipped vertically.
I perform these flips in stimulate software before converting to analyze
file format. When I display these axial slices in spm, the sagittal and
coronal reconstructions are upside down.
In an attempt to correct this, I changed the affine norm etimates during
spatial normalization to -1, -1, -1. However, when I try to display these
images, I get a blank display window. How can I check the images to
determine whether they are in the proper orientation? Is this the correct
fix?
thanks in advance!
Rachael
Rachael D. Seidler, PhD
University of Minnesota Dept of Neuroscience
and Brain Sciences Center (11B)
Veterans Affairs Medical Center
One Veterans Drive
Minneapolis, MN 55417
Phone: 612 725-2000 x.1765
Fax: 612 725-2291
Email: [log in to unmask]
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